Skip to content

Resources

This page collects videos and blog posts about nf-test created by the community.
Have you authored a blog post or given a talk about nf-test? Feel free to contact us, and we will be delighted to feature it here.


Blog post: Leveraging nf-test for enhanced quality control in nf-core

Reproducibility is an important attribute of all good science. This is specially true in the realm of bioinformatics, where software is hopefully being constantly updated, and pipelines are ideally being maintained. This blog post covers nf-test in the nf-core context.

Read blog post


nf-core/bytesize: Converting pytest modules to nf-test

Adam Talbot & Sateesh Peri do a live demo of converting nf-core DSL2 modules pytests to nf-test

The presentation was recored as part of the nf-core/bytesize series.


nf-test: a simple but powerful testing framework for Nextflow pipelines

Lukas Forer provides an overview of nf-test, its evolution over time and up-coming features.

The presentation was recorded as part of the 2023 Nextflow Summit in Barcelona.


nf-test, a simple test framework specifically tailored for Nextflow pipelines

Sateesh Peri does a hands-on exploration of nf-test, a simple test framework specifically tailored for Nextflow pipelines.

Slides to follow along can be found here.

The presentation was recorded as part of the Workflows Community Meetup - All Things Groovy at the Wellcome Genome Campus.


nf-core/bytesize: nf-test

Edmund Miller shares with us his impressions about nf-test from a user perspective. nf-test is a simple test framework for Nextflow pipelines.

The presentation was recored as part of the nf-core/bytesize


Episode 8: nf-test, mentorships and debugging resume

Phil Ewels, Chris Hakkaart and Marcel Ribeiro-Dantas chat about the nf-test framework for testing Nextflow pipelines.

The presentation was part of the "News & Views" episode of Channels (Nextflow Podcast).


Blog post: A simple test framework for Nextflow pipelines

Discover how nf-test originated from the need to efficiently and automatically test production-ready Nextflow pipelines.

Read blog post